Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ74385.1 | SEA71516.1 | SAMN05444370_101115 | SAMN05444370_1109 | Cytochrome c. | Cytochrome c. | 0.872 |
SDZ74385.1 | SEA71540.1 | SAMN05444370_101115 | SAMN05444370_11010 | Cytochrome c. | Cytochrome c. | 0.709 |
SDZ74385.1 | SEA79193.1 | SAMN05444370_101115 | SAMN05444370_11210 | Cytochrome c. | Protein SCO1/2. | 0.662 |
SDZ74385.1 | SEA89253.1 | SAMN05444370_101115 | SAMN05444370_11639 | Cytochrome c. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.908 |
SDZ74385.1 | ctaA | SAMN05444370_101115 | SAMN05444370_12114 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.671 |
SDZ74385.1 | ctaG | SAMN05444370_101115 | SAMN05444370_11642 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.882 |
SEA20931.1 | SEA72720.1 | SAMN05444370_103467 | SAMN05444370_11065 | Hypothetical protein. | Thiol-disulfide isomerase or thioredoxin. | 0.439 |
SEA20931.1 | SEA79193.1 | SAMN05444370_103467 | SAMN05444370_11210 | Hypothetical protein. | Protein SCO1/2. | 0.719 |
SEA20931.1 | SEA89253.1 | SAMN05444370_103467 | SAMN05444370_11639 | Hypothetical protein. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.929 |
SEA71516.1 | SDZ74385.1 | SAMN05444370_1109 | SAMN05444370_101115 | Cytochrome c. | Cytochrome c. | 0.872 |
SEA71516.1 | SEA71540.1 | SAMN05444370_1109 | SAMN05444370_11010 | Cytochrome c. | Cytochrome c. | 0.997 |
SEA71516.1 | SEA79193.1 | SAMN05444370_1109 | SAMN05444370_11210 | Cytochrome c. | Protein SCO1/2. | 0.634 |
SEA71516.1 | SEA89253.1 | SAMN05444370_1109 | SAMN05444370_11639 | Cytochrome c. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.950 |
SEA71516.1 | ctaA | SAMN05444370_1109 | SAMN05444370_12114 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.792 |
SEA71516.1 | ctaG | SAMN05444370_1109 | SAMN05444370_11642 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.848 |
SEA71540.1 | SDZ74385.1 | SAMN05444370_11010 | SAMN05444370_101115 | Cytochrome c. | Cytochrome c. | 0.709 |
SEA71540.1 | SEA71516.1 | SAMN05444370_11010 | SAMN05444370_1109 | Cytochrome c. | Cytochrome c. | 0.997 |
SEA71540.1 | SEA79193.1 | SAMN05444370_11010 | SAMN05444370_11210 | Cytochrome c. | Protein SCO1/2. | 0.657 |
SEA71540.1 | SEA89253.1 | SAMN05444370_11010 | SAMN05444370_11639 | Cytochrome c. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.994 |
SEA71540.1 | ctaA | SAMN05444370_11010 | SAMN05444370_12114 | Cytochrome c. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.794 |
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