STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA85374.1Methyltransferase small domain-containing protein. (457 aa)    
Predicted Functional Partners:
SEA87624.1
Antirestriction protein ArdC.
     0.877
SEA87788.1
Protein of unknown function.
  
     0.775
SEB01029.1
Protein of unknown function.
  
     0.775
SEA87488.1
Hypothetical protein.
 
     0.774
SEA87588.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
     0.772
SEB09827.1
Resolvase, N terminal domain.
  
     0.721
SEA87407.1
Protein of unknown function.
  
     0.688
SEA64752.1
Plasmid replication initiator protein.
  
     0.671
SEA87824.1
Uncharacterized conserved protein, DUF736 family.
  
     0.585
SEA87716.1
Uncharacterized conserved protein, DUF736 family.
  
     0.559
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.