STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA84441.1Protein SCO1/2. (226 aa)    
Predicted Functional Partners:
SEA72720.1
Thiol-disulfide isomerase or thioredoxin.
 
   0.933
SEA89253.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.931
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.808
SEA84459.1
Hypothetical protein.
       0.779
SEA84479.1
Hypothetical protein.
       0.778
SEA20931.1
Hypothetical protein.
 
   
 0.700
SEA71516.1
Cytochrome c.
 
  
 0.676
SEA71540.1
Cytochrome c.
    
 0.657
SDZ74385.1
Cytochrome c.
 
  
 0.617
SEA00815.1
Cytochrome c.
 
  
 0.568
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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