STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA96588.1Protein of unknown function DUF58. (295 aa)    
Predicted Functional Partners:
SEA96622.1
mxaC protein.
 
  
 0.957
SEA96598.1
mxaA protein.
 
   
 0.954
SEA96655.1
mxaL protein.
 
  
 0.954
SEA96632.1
mxaK protein.
 
     0.953
SEA96575.1
MoxR-like ATPase.
 
  
 0.951
SEA96665.1
mxaD protein.
 
     0.948
SEA96567.1
Methanol dehydrogenase (cytochrome) small subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
   
 0.906
SEA96550.1
Cytochrome cL apoprotein; Electron acceptor for MDH. Acts in methanol oxidation.
 
   
 0.871
SEA96535.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.849
SEA96517.1
Methanol dehydrogenase (cytochrome) large subunit apoprotein.
 
    0.814
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.