STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB05523.1Putative ABC transport system ATP-binding protein. (222 aa)    
Predicted Functional Partners:
SEA22032.1
Lipoprotein-releasing system permease protein.
 0.981
SEB05538.1
Putative ABC transport system permease protein.
 
  0.975
SEA50564.1
Putative ABC transport system permease protein.
  
 0.926
SEA46779.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.788
SEB05510.1
Hypothetical protein.
       0.773
SEB05559.1
Nickel transport protein.
 
     0.750
SEB05547.1
Cobalt/nickel transport protein.
       0.697
SDZ93347.1
Putative ABC transport system permease protein.
 
  0.692
SEA09825.1
Putative ABC transport system permease protein.
  
  0.692
SDZ74731.1
NitT/TauT family transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein.
  
 
  0.683
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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