STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB07149.1NitT/TauT family transport system permease protein. (250 aa)    
Predicted Functional Partners:
SEB07159.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.934
SEB07135.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.932
SDZ99439.1
Taurine transport system substrate-binding protein.
 
 
 0.919
tauB
Taurine transport system ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
 
  0.881
SEB07887.1
ABC-2 type transport system permease protein.
  
     0.766
SEB08734.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.764
SEB08743.1
PQQ-dependent catabolism-associated beta-propeller protein.
  
     0.737
SEB07878.1
ABC-2 type transport system ATP-binding protein.
  
  
  0.681
SEB07170.1
Protein of unknown function.
 
     0.673
SEA33254.1
NitT/TauT family transport system permease protein.
  
  
  0.649
Your Current Organism:
Rubrimonas cliftonensis
NCBI taxonomy Id: 89524
Other names: CIP 105913, DSM 15345, JCM 10189, NBRC 100047, R. cliftonensis, strain OCh 317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.