STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HdaHHistone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
AQV02840.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.927
AQV02472.2
Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.846
TmcD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.829
VrlO
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.767
B2D07_17910
Neutral zinc metallopeptidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.767
LysS1
EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.764
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.719
AQV01617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.650
AQV02595.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.650
AQV00977.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.623
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.