VrlG protein (Desulfococcus multivorans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Desulfococcus multivorans

NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQV01706.1	AQV02401.1	B2D07_13675	B2D07_17600	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	0.953
AQV01706.1	GlnA	B2D07_13675	B2D07_19135	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AQV01706.1	PurQ	B2D07_13675	B2D07_06225	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AQV01706.1	VrlG	B2D07_13675	B2D07_03085	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucosamine 6-phosphate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AQV01706.1	carA	B2D07_13675	B2D07_02645	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbamoyl-phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.	0.921
AQV01706.1	carB	B2D07_13675	B2D07_02655	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AQV01706.1	carB-2	B2D07_13675	B2D07_07515	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.	0.950
AQV01706.1	purE	B2D07_13675	B2D07_18695	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylamine--glycine ligase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR); Belongs to the GARS family.	0.724
AQV02401.1	AQV01706.1	B2D07_17600	B2D07_13675	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
AQV02401.1	GlnA	B2D07_17600	B2D07_19135	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
AQV02401.1	PurQ	B2D07_17600	B2D07_06225	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AQV02401.1	VrlG	B2D07_17600	B2D07_03085	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Glucosamine 6-phosphate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AQV02401.1	carA	B2D07_17600	B2D07_02645	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Carbamoyl-phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.	0.911
AQV02401.1	carB	B2D07_17600	B2D07_02655	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AQV02401.1	carB-2	B2D07_17600	B2D07_07515	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.	0.921
AQV02401.1	purE	B2D07_17600	B2D07_18695	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	Phosphoribosylamine--glycine ligase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR); Belongs to the GARS family.	0.489
GlnA	AQV01706.1	B2D07_19135	B2D07_13675	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
GlnA	AQV02401.1	B2D07_19135	B2D07_17600	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	0.920
GlnA	PurQ	B2D07_19135	B2D07_06225	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosylformylglycinamidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
GlnA	VrlG	B2D07_19135	B2D07_03085	Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucosamine 6-phosphate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918