STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VrlPAlkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)    
Predicted Functional Partners:
VrlL
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.958
VrlO
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.957
VrlQ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
VrlK
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.909
VrlJ
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.906
AQU99863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.792
AQU99862.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
       0.773
VrlR
Virulence associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
VrlS
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
VrlI
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.