Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
AQU99915.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
FadD2
Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.801
AQU99916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
AQU99917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
AQU99918.1
ATP-dependent exonuclease SbcCD, C subunit-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
AQU99919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
AQU99607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
PfaA
Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.535
AQU99595.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.519
AQU99913.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.460
AQU99831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
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