STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQV00042.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (67 aa)    
Predicted Functional Partners:
TrkB1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
TrkH1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AQV00045.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.769
TrkA3
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.758
AQV00046.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
TrkA2
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
TrkA1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.659
AQV00050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.620
AQV01070.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.607
AQU99474.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.493
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.