STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQV00100.1Nitric oxide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
WrbA
NAD(P)H:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.617
AQV02538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.546
Dfx
Desulfoferrodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.527
CooS1
Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.525
AQV00098.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
AQV00099.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
AQV00097.1
Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.460
AQV01891.1
Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.418
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
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