STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQV00821.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)    
Predicted Functional Partners:
AQV01101.1
Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.979
LysA2
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.920
LysA1
Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
KamA
Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.901
KamA-2
Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.901
AQU99987.1
KamA family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.901
Alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.777
AQV00822.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
AQV00614.1
Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.528
ExoA
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
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