Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AQV00943.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)    
Predicted Functional Partners:
AQV00944.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.941
AQV01070.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.798
AQV00945.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.761
AQU99380.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.744
AQV01065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.744
AQV00929.2
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.730
AQV01968.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.730
AQV02086.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.724
AQV01667.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.699
AQV01845.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.697
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
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