CsdB protein (Desulfococcus multivorans) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

CsdB

Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)

Predicted Functional Partners:

AQV00289.1

0.969

AQV01103.1

0.953

AQV02447.1

0.953

AQV01661.1

0.936

TrxB3

0.931

TrxB1

0.929

TrxB2

0.928

AQV01277.1

0.919

selD

0.914

SelD

0.914

Your Current Organism:

Desulfococcus multivorans

NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQV00289.1	AQV01103.1	B2D07_05545	B2D07_10205	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.636
AQV00289.1	AQV01277.1	B2D07_05545	B2D07_11210	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
AQV00289.1	AQV01661.1	B2D07_05545	B2D07_13415	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
AQV00289.1	AQV02447.1	B2D07_05545	B2D07_17860	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
AQV00289.1	CsdB	B2D07_05545	B2D07_10315	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AQV00289.1	TrxB1	B2D07_05545	B2D07_02900	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
AQV00289.1	TrxB2	B2D07_05545	B2D07_03715	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.637
AQV00289.1	TrxB3	B2D07_05545	B2D07_07575	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AQV01103.1	AQV00289.1	B2D07_10205	B2D07_05545	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.636
AQV01103.1	AQV01277.1	B2D07_10205	B2D07_11210	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AQV01103.1	CsdB	B2D07_10205	B2D07_10315	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
AQV01277.1	AQV00289.1	B2D07_11210	B2D07_05545	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.878
AQV01277.1	AQV01103.1	B2D07_11210	B2D07_10205	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AQV01277.1	AQV01661.1	B2D07_11210	B2D07_13415	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
AQV01277.1	AQV02447.1	B2D07_11210	B2D07_17860	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster assembly scaffold protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AQV01277.1	CsdB	B2D07_11210	B2D07_10315	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AQV01661.1	AQV00289.1	B2D07_13415	B2D07_05545	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.	0.809
AQV01661.1	AQV01277.1	B2D07_13415	B2D07_11210	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
AQV01661.1	CsdB	B2D07_13415	B2D07_10315	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
AQV01661.1	SelD	B2D07_13415	B2D07_12640	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Selenide, water dikinase SelD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911