STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQV02014.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)    
Predicted Functional Partners:
CdhD
acetyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.918
CdhE
acetyl-CoA decarbonylase/synthase complex subunit gamma; Part of a complex that catalyzes the cleavage of acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.916
AQV00568.1
Fe-S cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.796
CdhC
CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
MetH
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.791
CooC
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.753
AQV01600.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
MttB1
Trimethylamine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the trimethylamine methyltransferase family.
 
     0.739
CdhA
Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.727
CooS1
Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.720
Your Current Organism:
Desulfococcus multivorans
NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1
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