AQV02349.1 protein (Desulfococcus multivorans)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AQV02349.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)

Predicted Functional Partners:

AQV02350.1

0.994

AQV02348.1

0.981

AQV02351.1

0.886

AQU99701.1

0.878

AQV01249.2

0.793

B2D07_12680

0.775

AQV02785.1

0.775

AQV00166.1

0.768

YbhF

0.755

AQV00998.1

0.755

Your Current Organism:

Desulfococcus multivorans

NCBI taxonomy Id: 897
Other names: ATCC 33890, D. multivorans, DSM 2059, strain 1be1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQU99701.1	AQV00166.1	B2D07_02180	B2D07_04850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AQU99701.1	AQV00998.1	B2D07_02180	B2D07_09630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQU99701.1	AQV01249.2	B2D07_02180	B2D07_11040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQU99701.1	AQV02348.1	B2D07_02180	B2D07_17305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
AQU99701.1	AQV02349.1	B2D07_02180	B2D07_17310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
AQU99701.1	AQV02785.1	B2D07_02180	B2D07_19770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
AQU99701.1	B2D07_12680	B2D07_02180	B2D07_12680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
AQU99701.1	YbhF	B2D07_02180	B2D07_03625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQV00166.1	AQU99701.1	B2D07_04850	B2D07_02180	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AQV00166.1	AQV02349.1	B2D07_04850	B2D07_17310	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
AQV00166.1	AQV02785.1	B2D07_04850	B2D07_19770	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AQV00166.1	B2D07_12680	B2D07_04850	B2D07_12680	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AQV00166.1	YbhF	B2D07_04850	B2D07_03625	Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.435
AQV00998.1	AQU99701.1	B2D07_09630	B2D07_02180	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQV00998.1	AQV02349.1	B2D07_09630	B2D07_17310	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
AQV00998.1	AQV02785.1	B2D07_09630	B2D07_19770	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AQV00998.1	B2D07_12680	B2D07_09630	B2D07_12680	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AQV01249.2	AQU99701.1	B2D07_11040	B2D07_02180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQV01249.2	AQV02349.1	B2D07_11040	B2D07_17310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
AQV01249.2	AQV02785.1	B2D07_11040	B2D07_19770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NosL family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445