STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW01012.1Kef-type K+ transport system, membrane component KefB. (394 aa)    
Predicted Functional Partners:
SDW30682.1
Flagellar hook protein FlgE.
    
   0.826
SDW90047.1
Flagellar basal body rod FlgEFG protein C-terminal.
    
   0.826
SDW90093.1
Flagellar basal-body rod protein FlgG.
    
   0.826
SDW38112.1
Molybdopterin synthase catalytic subunit.
  
  
 0.788
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.780
SDW60574.1
Ca2+-transporting ATPase.
  
 
 0.719
SDW60389.1
16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.681
SDW00991.1
Hypothetical protein.
       0.599
SDW50124.1
NhaP-type Na+/H+ or K+/H+ antiporter.
   
 
 0.587
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.559
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.