STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW13042.1Penicillin-binding protein 2. (697 aa)    
Predicted Functional Partners:
SDW19765.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.886
SDW40050.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.873
SDW19842.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
 0.864
SDW61322.1
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.836
SDW61514.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.831
SDW40077.1
Rod shape-determining protein MreB.
 
 
 
 0.830
SDW90024.1
Rod shape-determining protein MreB.
 
 
 
 0.825
SDW53622.1
Penicillin binding protein transpeptidase domain-containing protein.
  
  
 0.807
SDW32187.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
 
 0.752
SDW71392.1
Penicillin-binding protein, 1A family.
  
 
 0.704
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.