STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW14759.1Uncharacterized conserved protein YjgD, DUF1641 family. (162 aa)    
Predicted Functional Partners:
SDW14780.1
Formate dehydrogenase major subunit.
 
    0.966
SDW14809.1
Uncharacterized protein YbcI.
 
     0.871
SDW50350.1
Formate dehydrogenase major subunit.
 
    0.855
SDW25763.1
Formate dehydrogenase major subunit.
 
    0.834
SDW25822.1
Uncharacterized protein YbcI.
 
     0.760
SDW02672.1
Spore coat protein JA.
  
     0.730
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.596
SDX03706.1
Helix-turn-helix.
  
     0.520
SDW92566.1
Uncharacterized protein YbcI.
  
     0.511
SDW14734.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.501
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.