STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW30160.1LysM domain-containing protein. (273 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.762
SDW64291.1
Cytidine deaminase.
   
 
  0.709
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
  
 
  0.708
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.701
SDW78239.1
Chemotaxis protein MotB.
 
 
 
 0.597
SDW23002.1
LysM domain-containing protein.
 
 
 0.596
SDW69172.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.584
SDW56840.1
Spore germination protein.
  
     0.575
cmk
Cytidylate kinase.
  
 
  0.515
SDW61597.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 
 0.506
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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