STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW58128.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
SDW58153.1
Hypothetical protein.
       0.746
SDW58101.1
Hypothetical protein.
       0.727
SDW58035.1
Type II secretion system (T2SS), protein M.
       0.707
SDW58058.1
Fimbrial assembly protein (PilN).
       0.707
SDW58079.1
Type IV pilus assembly protein PilM.
       0.707
SDW58177.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.561
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.