Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW01772.1 | SDW57405.1 | SAMN04489725_10164 | SAMN04489725_10867 | Penicillin-binding protein 1A. | Penicillin-binding protein 2A. | 0.552 |
SDW01772.1 | SDW57533.1 | SAMN04489725_10164 | SAMN04489725_10873 | Penicillin-binding protein 1A. | Putative peptidoglycan binding domain-containing protein. | 0.723 |
SDW01772.1 | SDW61597.1 | SAMN04489725_10164 | SAMN04489725_10984 | Penicillin-binding protein 1A. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.886 |
SDW01772.1 | SDW61635.1 | SAMN04489725_10164 | SAMN04489725_10985 | Penicillin-binding protein 1A. | Penicillin-binding protein 2B. | 0.905 |
SDW01772.1 | SDW71392.1 | SAMN04489725_10164 | SAMN04489725_1129 | Penicillin-binding protein 1A. | Penicillin-binding protein, 1A family. | 0.548 |
SDW32928.1 | SDW57508.1 | SAMN04489725_104149 | SAMN04489725_10872 | Cell wall-associated hydrolase, NlpC family. | Putative peptidoglycan binding domain-containing protein. | 0.595 |
SDW32928.1 | SDW57533.1 | SAMN04489725_104149 | SAMN04489725_10873 | Cell wall-associated hydrolase, NlpC family. | Putative peptidoglycan binding domain-containing protein. | 0.831 |
SDW32928.1 | SDW79295.1 | SAMN04489725_104149 | SAMN04489725_1153 | Cell wall-associated hydrolase, NlpC family. | Putative peptidoglycan binding domain-containing protein. | 0.458 |
SDW45213.1 | SDW57533.1 | SAMN04489725_10633 | SAMN04489725_10873 | Cyanophycin synthetase. | Putative peptidoglycan binding domain-containing protein. | 0.799 |
SDW45213.1 | SDW61597.1 | SAMN04489725_10633 | SAMN04489725_10984 | Cyanophycin synthetase. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.815 |
SDW45213.1 | SDW61635.1 | SAMN04489725_10633 | SAMN04489725_10985 | Cyanophycin synthetase. | Penicillin-binding protein 2B. | 0.815 |
SDW45213.1 | SDW79295.1 | SAMN04489725_10633 | SAMN04489725_1153 | Cyanophycin synthetase. | Putative peptidoglycan binding domain-containing protein. | 0.548 |
SDW57405.1 | SDW01772.1 | SAMN04489725_10867 | SAMN04489725_10164 | Penicillin-binding protein 2A. | Penicillin-binding protein 1A. | 0.552 |
SDW57405.1 | SDW57533.1 | SAMN04489725_10867 | SAMN04489725_10873 | Penicillin-binding protein 2A. | Putative peptidoglycan binding domain-containing protein. | 0.763 |
SDW57405.1 | SDW61597.1 | SAMN04489725_10867 | SAMN04489725_10984 | Penicillin-binding protein 2A. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.871 |
SDW57405.1 | SDW61635.1 | SAMN04489725_10867 | SAMN04489725_10985 | Penicillin-binding protein 2A. | Penicillin-binding protein 2B. | 0.874 |
SDW57405.1 | SDW71392.1 | SAMN04489725_10867 | SAMN04489725_1129 | Penicillin-binding protein 2A. | Penicillin-binding protein, 1A family. | 0.692 |
SDW57405.1 | SDW79295.1 | SAMN04489725_10867 | SAMN04489725_1153 | Penicillin-binding protein 2A. | Putative peptidoglycan binding domain-containing protein. | 0.738 |
SDW57508.1 | SDW32928.1 | SAMN04489725_10872 | SAMN04489725_104149 | Putative peptidoglycan binding domain-containing protein. | Cell wall-associated hydrolase, NlpC family. | 0.595 |
SDW57508.1 | SDW57533.1 | SAMN04489725_10872 | SAMN04489725_10873 | Putative peptidoglycan binding domain-containing protein. | Putative peptidoglycan binding domain-containing protein. | 0.911 |
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