STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW57533.1Putative peptidoglycan binding domain-containing protein. (313 aa)    
Predicted Functional Partners:
SDW57508.1
Putative peptidoglycan binding domain-containing protein.
    
0.911
SDW32928.1
Cell wall-associated hydrolase, NlpC family.
    
 0.831
SDW45213.1
Cyanophycin synthetase.
 
  
 0.799
SDW61597.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
     
 0.799
SDW61635.1
Penicillin-binding protein 2B.
     
 0.799
SDW57405.1
Penicillin-binding protein 2A.
    
 0.763
SDW79295.1
Putative peptidoglycan binding domain-containing protein.
 
  
 0.738
SDW57583.1
Protein of unknown function.
 
     0.736
SDW01772.1
Penicillin-binding protein 1A.
     
 0.723
SDW71392.1
Penicillin-binding protein, 1A family.
     
 0.723
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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