STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW97083.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
 0.699
SDW90264.1
TPR repeat-containing protein.
     
 0.685
SDW97108.1
Hypothetical protein.
       0.636
SDW89128.1
Two-component system, response regulator, stage 0 sporulation protein F.
    
  0.486
SDW97122.1
Hypothetical protein.
       0.451
SDW97152.1
Hypothetical protein.
       0.428
Your Current Organism:
Alicyclobacillus hesperidum
NCBI taxonomy Id: 89784
Other names: A. hesperidum, Alicyclobacillus hesperidum Albuquerque et al. 2000, DSM 12489, strain FR-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.