STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRF1Nuclear respiratory factor 1 isoform X1. (522 aa)    
Predicted Functional Partners:
TFAM
Transcription factor A, mitochondrial.
     
 0.884
PPARGC1B
Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1.
     
 0.775
PPARGC1A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
   
 0.765
PPRC1
LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma coactivator-related protein 1.
   
 0.720
TFB2M
Dimethyladenosine transferase 2, mitochondrial.
     
 0.615
CASP7
Caspase 7.
      
 0.608
LOC110393943
Cytochrome c.
     
 0.574
LOC110400110
Cytochrome c, somatic-like isoform X1.
     
 0.574
SIRT1
NAD-dependent protein deacetylase sirtuin-1 isoform X1.
    
 
 0.554
PRKN
Parkin RBR E3 ubiquitin protein ligase.
      
 0.547
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.