STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACER3Alkaline ceramidase 3. (267 aa)    
Predicted Functional Partners:
SPHK1
Sphingosine kinase 1.
    
 0.958
ASAH1
Acid ceramidase.
   
 
 0.944
PLPP2
Phospholipid phosphatase 2.
     
 0.939
SGPP2
Sphingosine-1-phosphate phosphatase 2.
     
 0.939
KDSR
3-ketodihydrosphingosine reductase.
     
 0.928
CERS1
Ceramide synthase 1 isoform X1.
    
 0.927
LOC110388988
Ceramide synthase 4-like isoform X1.
    
 0.927
CERS5
Sphingoid base N-palmitoyltransferase.
    
 0.927
CERS6
Sphingoid base N-palmitoyltransferase.
    
 0.927
DEGS1
Sphingolipid 4-desaturase/C4-monooxygenase.
   
 
 0.920
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.