STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4AU5 snRNP protein, DIM1 family. (142 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA-processing factor 6.
    
 0.995
DDX23
Probable ATP-dependent RNA helicase DDX23.
    
 0.989
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 0.987
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.986
SNRNP40
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 0.984
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.959
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.943
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
  0.943
SNRPF
Small nuclear ribonucleoprotein F.
   
  0.931
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
   
 0.895
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.