STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOA1Apolipoprotein A-I. (264 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B-100.
   
 0.946
LOC110387860
Apolipoprotein A-II-like.
   
 0.935
LCAT
Phosphatidylcholine-sterol acyltransferase.
   
 0.919
SCARB1
Scavenger receptor class B, member 1.
    
 0.824
LOC110391068
Vitellogenin-2.
   
 0.815
LOC110402334
Vitellogenin-2-like.
   
 0.815
LOC110402667
Vitellogenin-1.
   
 0.815
PLA2G15
Phospholipase A2 group XV.
   
 0.800
PLTP
Phospholipid transfer protein.
   
 0.792
APOA4
Apolipoprotein A-IV.
  
 
0.780
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.