STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRIX1Ribosome biogenesis protein BRX1 homolog. (351 aa)    
Predicted Functional Partners:
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.996
RRP1B
Ribosomal RNA processing protein 1 homolog B.
   
 
 0.995
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.995
BOP1
Ribosome biogenesis protein BOP1.
   
 
 0.992
NIP7
60S ribosome subunit biogenesis protein NIP7 homolog.
   
 
 0.990
RPF1
Ribosome production factor 1.
   
 
 0.990
GTPBP4
Nucleolar GTP-binding protein 1.
   
 
 0.989
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.988
WDR12
Ribosome biogenesis protein WDR12.
   
 
 0.988
NOC2L
Nucleolar complex protein 2 homolog.
   
 
 0.987
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.