STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPF2Regulator of nonsense transcripts 2 isoform X1. (1293 aa)    
Predicted Functional Partners:
UPF1
Regulator of nonsense transcripts 1 isoform X1.
   
 0.999
RNPS1
RNA-binding protein with serine-rich domain 1.
    
 0.993
SMG1
Serine/threonine-protein kinase SMG1 isoform X1.
   
 
 0.992
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 0.990
UPF3A
Regulator of nonsense transcripts 3A isoform X1.
   
 0.989
RBM8A
RNA-binding protein 8A.
    
 0.983
ZGRF1
Protein ZGRF1 isoform X1.
   
 0.952
ENSNMEP00000020704
annotation not available
   
 0.946
SRRM1
Serine/arginine repetitive matrix protein 1 isoform X1.
    
 
 0.931
MAGOH
Protein mago nashi homolog.
     
 0.903
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.