Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110398543Zinc finger matrin-type protein 1-like isoform X1. (523 aa)    
Predicted Functional Partners:
GSC2
Homeobox protein goosecoid-like.
      
 0.675
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
      
 0.576
ITFG1
Integrin alpha FG-GAP repeat containing protein 1.
      
 0.536
VSX1
Visual system homeobox 1.
      
 0.464
UNCX
Homeobox protein unc-4 homolog.
      
 0.450
DENND5B
DENN domain-containing protein 5B isoform X1.
   
  
 0.419
DENND5A
DENN domain-containing protein 5A isoform X1.
   
  
 0.419
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.419
DMTF1
Cyclin-D-binding Myb-like transcription factor 1 isoform X1.
      
 0.415
WDR1
WD repeat-containing protein 1.
      
 0.410
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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