STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PASD1Circadian clock protein PASD1 isoform X1. (823 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
0.805
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
0.805
PER3
Period circadian protein homolog 3 isoform X1.
    
0.700
PER2
Period circadian protein homolog 2 isoform X1.
    
0.700
CIPC
CLOCK-interacting pacemaker.
    
 
 0.601
CSNK1E
Casein kinase 1, epsilon.
    
 0.551
NPAS3
Neuronal PAS domain-containing protein 3 isoform X1.
    
0.543
CSNK1D
Casein kinase I isoform X1.
    
 0.541
AHR
Aryl hydrocarbon receptor isoform X1.
   
0.529
AHRR
Aryl hydrocarbon receptor repressor.
   
0.529
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.