STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP3Retinol-binding protein 3. (1236 aa)    
Predicted Functional Partners:
CLUL1
Clusterin-like protein 1.
   
  
 0.837
TULP1
Tubby-related protein 1 isoform X1.
   
  
 0.618
MAFA
Transcription factor MAFA.
      
 0.577
SERPIND1
Heparin cofactor II.
      
 0.575
LOC110388225
Complement component 4.
      
 0.563
IMPG1
Interphotoreceptor matrix proteoglycan 1.
   
  
 0.560
LOC110388211
Green-sensitive opsin.
   
  
 0.535
RHO
Rhodopsin.
   
  
 0.535
OPTC
Opticin.
   
  
 0.508
RGR
RPE-retinal G protein-coupled receptor.
   
  
 0.497
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.