Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSNMEP00000002007Valine--tRNA ligase, mitochondrial-like. (996 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.986
EEF1D
Eukaryotic translation elongation factor 1 delta.
   
 
 0.937
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.930
EEF1B2
Elongation factor 1-beta.
   
 
 0.903
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
   
 
 0.873
DARS2
Aspartate--tRNA ligase, mitochondrial.
  
  
 0.865
ABTB1
Ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1.
    
   0.855
IARS1
Isoleucine--tRNA ligase, cytoplasmic.
  
 
 0.844
LARS2
Probable leucine--tRNA ligase, mitochondrial.
   
 
 0.820
KARS1
Lysyl-tRNA synthetase, class II.
   
 
 0.799
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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