Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group RING finger protein 3. (242 aa)    
Predicted Functional Partners:
RNF2
E3 ubiquitin-protein ligase RING2 isoform X1.
    
 0.974
AUTS2
Autism susceptibility gene 2 protein isoform X1.
    
 0.940
DCAF7
DDB1- and CUL4-associated factor 7.
    
 0.922
PCGF1
Polycomb group RING finger protein 1 isoform X1.
    
 
 0.914
PCGF5
Polycomb group ring finger 5.
    
 
 0.913
RYBP
RING1 and YY1-binding protein isoform X1.
    
 0.909
ENSNMEP00000027492
annotation not available
    
 0.900
YAF2
YY1-associated factor 2.
    
 0.889
CBX8
Chromobox protein homolog 8 isoform X1.
    
 0.873
BCORL1
BCL-6 corepressor-like protein 1 isoform X1.
    
 0.862
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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