STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCXBasic helix-loop-helix transcription factor scleraxis. (186 aa)    
Predicted Functional Partners:
TNMD
Tenomodulin.
      
 0.660
MKX
Homeobox protein Mohawk.
      
 0.636
SEMA3D
Semaphorin-3D.
      
 0.619
MEOX1
Homeobox protein MOX-1.
   
 
 0.516
PAX1
Paired box protein Pax-1.
      
 0.497
LOC110406258
T-box-containing protein TBX6L isoform X1.
    
 0.495
SOX9
Transcription factor SOX9 (SOX group E).
    
 
 0.492
TBX18
T-box transcription factor TBX18.
      
 0.478
PAX3
Paired box 3.
      
 0.476
LOC110391943
Uncharacterized protein LOC110391943 isoform X1.
    
 0.411
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.