STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110392014Cleavage and polyadenylation specificity factor subunit 1-like. (414 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.960
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.958
ENSNMEP00000001928
annotation not available
    
 0.956
WDR33
Pre-mRNA 3' end processing protein WDR33 isoform X1.
   
 0.956
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.951
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
    
 0.951
CSTF2
Cleavage stimulation factor subunit 2 isoform X1.
   
 0.937
ENSNMEP00000003790
Cleavage and polyadenylation specificity factor subunit 1-like.
 
     0.929
RBBP6
E3 ubiquitin-protein ligase RBBP6.
    
 
 0.900
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.894
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.