STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WIPI1WD repeat domain, phosphoinositide interacting 1. (527 aa)    
Predicted Functional Partners:
ATG16L1
Autophagy-related protein 16-1 isoform X1.
   
 0.957
ATG5
Autophagy-related protein 5.
    
 0.911
ATG12
Autophagy related 12.
    
 0.886
BECN1
Beclin 1.
    
 0.834
ATG2B
Autophagy-related protein 2 homolog B isoform X1.
    
 
 0.830
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3 isoform X1.
     
 0.813
ATG3
Autophagy related 3.
    
 0.799
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X1.
    
 0.797
ULK1
Unc-51 like autophagy activating kinase 1.
    
 
 0.791
PIK3R4
Phosphoinositide-3-kinase, regulatory subunit 4.
     
 0.766
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.