STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMPCartilage oligomeric matrix protein isoform X1. (807 aa)    
Predicted Functional Partners:
CD47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.947
ITGB3
Integrin beta-3 isoform X1.
    
 0.947
ITGAV
Integrin alpha V.
   
 0.942
ITGB1
Integrin beta-1 isoform X1.
    
 0.924
CD36
Platelet glycoprotein 4.
    
 0.910
SDC1
Syndecan 1.
    
 0.910
SDC4
Syndecan 4.
     
  0.901
ACAN
Aggrecan core protein isoform X1.
   
 0.871
ITGB7
Integrin beta 7.
    
 0.735
ITGB8
Integrin beta-8 isoform X1.
    
 0.718
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.