STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA52Ubiquitin-60S ribosomal protein L40 isoform X1. (272 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
  
0.999
RPS16
Small subunit ribosomal protein S16e.
  
 0.998
RPS11
Ribosomal protein S11.
   
 0.998
RPS15
Small subunit ribosomal protein S15e.
   
 0.998
RPS25
Small subunit ribosomal protein S25e.
   
 0.998
RPS28
Small subunit ribosomal protein S28e.
   
 0.998
RPS6
Small subunit ribosomal protein S6e.
   
 0.998
RPSA
Small subunit ribosomal protein SAe.
  
 0.998
RPS4X
40S ribosomal protein S4, X isoform.
   
 0.998
RPS3A
Small subunit ribosomal protein S3Ae.
   
 0.998
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.