Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BACE1 | NRG1 | ENSNMEP00000001729 | ENSNMEP00000003902 | Beta-site APP-cleaving enzyme 1 (memapsin 2). | Pro-neuregulin-1, membrane-bound isoform isoform X1. | 0.620 |
BMP10 | ERBB2 | ENSNMEP00000021130 | ENSNMEP00000006621 | Bone morphogenetic protein 10. | Receptor tyrosine-protein kinase erbB-2. | 0.480 |
BMP10 | NRG1 | ENSNMEP00000021130 | ENSNMEP00000003902 | Bone morphogenetic protein 10. | Pro-neuregulin-1, membrane-bound isoform isoform X1. | 0.575 |
EGF | EGFR | ENSNMEP00000006384 | ENSNMEP00000000843 | Pro-epidermal growth factor. | Epidermal growth factor receptor. | 0.999 |
EGF | ENSNMEP00000017029 | ENSNMEP00000006384 | ENSNMEP00000017029 | Pro-epidermal growth factor. | Vegetative cell wall protein gp1-like. | 0.893 |
EGF | ENSNMEP00000017030 | ENSNMEP00000006384 | ENSNMEP00000017030 | Pro-epidermal growth factor. | annotation not available | 0.893 |
EGF | ERBB2 | ENSNMEP00000006384 | ENSNMEP00000006621 | Pro-epidermal growth factor. | Receptor tyrosine-protein kinase erbB-2. | 0.994 |
EGF | ERBB4 | ENSNMEP00000006384 | ENSNMEP00000021344 | Pro-epidermal growth factor. | Receptor tyrosine-protein kinase erbB-4 isoform X1. | 0.975 |
EGF | NRG1 | ENSNMEP00000006384 | ENSNMEP00000003902 | Pro-epidermal growth factor. | Pro-neuregulin-1, membrane-bound isoform isoform X1. | 0.748 |
EGF | UBC | ENSNMEP00000006384 | ENSNMEP00000016238 | Pro-epidermal growth factor. | Polyubiquitin-C isoform X1. | 0.575 |
EGFR | EGF | ENSNMEP00000000843 | ENSNMEP00000006384 | Epidermal growth factor receptor. | Pro-epidermal growth factor. | 0.999 |
EGFR | ENSNMEP00000017029 | ENSNMEP00000000843 | ENSNMEP00000017029 | Epidermal growth factor receptor. | Vegetative cell wall protein gp1-like. | 0.608 |
EGFR | ENSNMEP00000017030 | ENSNMEP00000000843 | ENSNMEP00000017030 | Epidermal growth factor receptor. | annotation not available | 0.608 |
EGFR | ERBB2 | ENSNMEP00000000843 | ENSNMEP00000006621 | Epidermal growth factor receptor. | Receptor tyrosine-protein kinase erbB-2. | 0.929 |
EGFR | ERBB4 | ENSNMEP00000000843 | ENSNMEP00000021344 | Epidermal growth factor receptor. | Receptor tyrosine-protein kinase erbB-4 isoform X1. | 0.617 |
EGFR | MEMO1 | ENSNMEP00000000843 | ENSNMEP00000000440 | Epidermal growth factor receptor. | MEMO1 family protein. | 0.460 |
EGFR | NRG1 | ENSNMEP00000000843 | ENSNMEP00000003902 | Epidermal growth factor receptor. | Pro-neuregulin-1, membrane-bound isoform isoform X1. | 0.868 |
EGFR | UBC | ENSNMEP00000000843 | ENSNMEP00000016238 | Epidermal growth factor receptor. | Polyubiquitin-C isoform X1. | 0.532 |
ENSNMEP00000017029 | EGF | ENSNMEP00000017029 | ENSNMEP00000006384 | Vegetative cell wall protein gp1-like. | Pro-epidermal growth factor. | 0.893 |
ENSNMEP00000017029 | EGFR | ENSNMEP00000017029 | ENSNMEP00000000843 | Vegetative cell wall protein gp1-like. | Epidermal growth factor receptor. | 0.608 |
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