STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf174Chromosome 20 C1orf174 homolog. (220 aa)    
Predicted Functional Partners:
MRPS16
28S ribosomal protein S16, mitochondrial.
   
  
 0.871
CAMTA1
Calmodulin-binding transcription activator 1 isoform X1.
      
 0.592
GGA2
ADP-ribosylation factor-binding protein GGA2.
      
 0.559
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
      
 0.544
MRPL22
39S ribosomal protein L22, mitochondrial.
   
    0.502
PARK7
Protein DJ-1.
      
 0.478
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.