STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATD1Parkinson disease 7 domain-containing protein 1 isoform X1. (230 aa)    
Predicted Functional Partners:
PPP1R21
Protein phosphatase 1 regulatory subunit 21 isoform X1.
    
   0.782
LOC110391347
Dynein assembly factor 3, axonemal-like.
   
 0.705
TNNI3
Troponin I, cardiac muscle.
   
 0.705
TNNI1
Troponin I, slow skeletal muscle isoform X1.
   
 0.705
TNNI2
Troponin I2, fast skeletal type.
   
 0.705
DRD4
D(4) dopamine receptor.
      
 0.657
EPS8L2
Epidermal growth factor receptor kinase substrate 8-like protein 2.
      
 0.632
TPM4
Tropomyosin alpha-4 chain isoform X1.
   
 0.619
ENSNMEP00000004694
annotation not available
   
 0.619
TPM3
Tropomyosin alpha-3 chain isoform X1.
   
 0.619
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.