STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX1ATP-dependent RNA helicase DDX1 isoform X1. (730 aa)    
Predicted Functional Partners:
DHX36
ATP-dependent RNA helicase DHX36.
   
 0.972
RTRAF
UPF0568 protein C14orf166 homolog.
   
 0.968
RTCB
TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase).
   
 0.940
LOC110400586
Nucleolar RNA helicase 2-like.
  
 
0.939
FAM98A
Protein FAM98A.
   
 
 0.933
FAM98B
Protein FAM98B.
    
 0.900
C2orf49
Ashwin isoform X1.
    
 0.847
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1.
   
 0.827
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.699
ZBTB8OS
Protein archease.
     
 0.692
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.