LDLRAD4 protein (Numida meleagris) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LDLRAD4

Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1. (198 aa)

Predicted Functional Partners:

RPS2

0.803

BYSL

0.632

ENSNMEP00000011786

0.628

ENSNMEP00000011791

0.628

LOC110387530

0.628

TSR1

0.622

SMAD2

0.614

SMAD3

0.614

SETD1B

0.585

RRP12

0.562

Your Current Organism:

Numida meleagris

NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BYSL	LDLRAD4	ENSNMEP00000003676	ENSNMEP00000005571	Essential nuclear protein 1.	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	0.632
BYSL	RPS2	ENSNMEP00000003676	ENSNMEP00000013215	Essential nuclear protein 1.	Small subunit ribosomal protein S2e.	0.991
BYSL	RRP12	ENSNMEP00000003676	ENSNMEP00000015331	Essential nuclear protein 1.	Ribosomal RNA-processing protein 12.	0.993
BYSL	TSR1	ENSNMEP00000003676	ENSNMEP00000017981	Essential nuclear protein 1.	Pre-rRNA-processing protein TSR1 homolog.	0.998
ENSNMEP00000011786	LDLRAD4	ENSNMEP00000011786	ENSNMEP00000005571	annotation not available	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	0.628
ENSNMEP00000011786	SETD1B	ENSNMEP00000011786	ENSNMEP00000022054	annotation not available	SET domain containing 1B, histone lysine methyltransferase.	0.827
ENSNMEP00000011791	LDLRAD4	ENSNMEP00000011791	ENSNMEP00000005571	annotation not available	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	0.628
ENSNMEP00000011791	SETD1B	ENSNMEP00000011791	ENSNMEP00000022054	annotation not available	SET domain containing 1B, histone lysine methyltransferase.	0.827
LDLRAD4	BYSL	ENSNMEP00000005571	ENSNMEP00000003676	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Essential nuclear protein 1.	0.632
LDLRAD4	ENSNMEP00000011786	ENSNMEP00000005571	ENSNMEP00000011786	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	annotation not available	0.628
LDLRAD4	ENSNMEP00000011791	ENSNMEP00000005571	ENSNMEP00000011791	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	annotation not available	0.628
LDLRAD4	LOC110387530	ENSNMEP00000005571	ENSNMEP00000011793	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Histone H4.	0.628
LDLRAD4	RPS2	ENSNMEP00000005571	ENSNMEP00000013215	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Small subunit ribosomal protein S2e.	0.803
LDLRAD4	RRP12	ENSNMEP00000005571	ENSNMEP00000015331	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Ribosomal RNA-processing protein 12.	0.562
LDLRAD4	SETD1B	ENSNMEP00000005571	ENSNMEP00000022054	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	SET domain containing 1B, histone lysine methyltransferase.	0.585
LDLRAD4	SMAD2	ENSNMEP00000005571	ENSNMEP00000017334	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Mothers against decapentaplegic homolog 2 isoform X1.	0.614
LDLRAD4	SMAD3	ENSNMEP00000005571	ENSNMEP00000027840	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Mothers against decapentaplegic homolog 3 isoform X1.	0.614
LDLRAD4	TSR1	ENSNMEP00000005571	ENSNMEP00000017981	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	Pre-rRNA-processing protein TSR1 homolog.	0.622
LOC110387530	LDLRAD4	ENSNMEP00000011793	ENSNMEP00000005571	Histone H4.	Low-density lipoprotein receptor class A domain-containing protein 4 isoform X1.	0.628
LOC110387530	SETD1B	ENSNMEP00000011793	ENSNMEP00000022054	Histone H4.	SET domain containing 1B, histone lysine methyltransferase.	0.827