STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR3Cadherin-related family member 3 isoform X1. (881 aa)    
Predicted Functional Partners:
CDHR4
LOW QUALITY PROTEIN: cadherin-related family member 4.
   
  
0.636
PPP1R16B
Protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1.
    
 0.623
RWDD1
RWD domain-containing protein 1.
      
 0.617
ORMDL3
ORM1-like protein 3.
      
 0.581
RNF24
RING finger protein 24 isoform X1.
      
 0.571
LDLRAD1
Low-density lipoprotein receptor class A domain-containing protein 1.
    
 
 0.481
PCDH1
Protocadherin-1 isoform X1.
      
0.478
TXLNB
Beta-taxilin.
      
 0.478
CDHR2
Cadherin-related family member 2.
      
0.477
VPS9D1
VPS9 domain-containing protein 1.
      
 0.476
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.