STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL27A1Collagen alpha-1(XXVII) chain isoform X1. (276 aa)    
Predicted Functional Partners:
ENSNMEP00000006470
annotation not available
 
      0.899
ENSNMEP00000024887
annotation not available
 
      0.613
TTC39C
Tetratricopeptide repeat protein 39C isoform X1.
      
 0.476
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
    
 0.471
COL8A1
Collagen alpha-1(VIII) chain.
 
   
 0.442
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.431
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.404
COL6A2
Collagen alpha-2(VI) chain isoform X1.
 
 
 0.404
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.