Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAPSL | CDC42SE2 | ENSNMEP00000002904 | ENSNMEP00000000389 | Calcyphosin-like protein. | CDC42 small effector protein 2. | 0.620 |
CAPSL | DEPDC1B | ENSNMEP00000002904 | ENSNMEP00000006820 | Calcyphosin-like protein. | DEP domain-containing protein 1B isoform X1. | 0.762 |
CAPSL | LMBRD2 | ENSNMEP00000002904 | ENSNMEP00000002906 | Calcyphosin-like protein. | LMBR1 domain-containing protein 2. | 0.747 |
CAPSL | LYRM7 | ENSNMEP00000002904 | ENSNMEP00000000409 | Calcyphosin-like protein. | Complex III assembly factor LYRM7 isoform X1. | 0.622 |
CAPSL | NDUFAF2 | ENSNMEP00000002904 | ENSNMEP00000006834 | Calcyphosin-like protein. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2. | 0.619 |
CAPSL | PGM5 | ENSNMEP00000002904 | ENSNMEP00000009985 | Calcyphosin-like protein. | Phosphoglucomutase-like protein 5. | 0.622 |
CAPSL | RAI2 | ENSNMEP00000002904 | ENSNMEP00000017855 | Calcyphosin-like protein. | Retinoic acid-induced protein 2. | 0.660 |
CAPSL | RIT2 | ENSNMEP00000002904 | ENSNMEP00000017380 | Calcyphosin-like protein. | GTP-binding protein Rit2. | 0.669 |
CAPSL | SCML2 | ENSNMEP00000002904 | ENSNMEP00000017852 | Calcyphosin-like protein. | Sex comb on midleg-like protein 2 isoform X1. | 0.622 |
CDC42SE2 | CAPSL | ENSNMEP00000000389 | ENSNMEP00000002904 | CDC42 small effector protein 2. | Calcyphosin-like protein. | 0.620 |
CDC42SE2 | DEPDC1B | ENSNMEP00000000389 | ENSNMEP00000006820 | CDC42 small effector protein 2. | DEP domain-containing protein 1B isoform X1. | 0.661 |
CDC42SE2 | LMBRD2 | ENSNMEP00000000389 | ENSNMEP00000002906 | CDC42 small effector protein 2. | LMBR1 domain-containing protein 2. | 0.620 |
CDC42SE2 | LYRM7 | ENSNMEP00000000389 | ENSNMEP00000000409 | CDC42 small effector protein 2. | Complex III assembly factor LYRM7 isoform X1. | 0.656 |
CDC42SE2 | NDUFAF2 | ENSNMEP00000000389 | ENSNMEP00000006834 | CDC42 small effector protein 2. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2. | 0.571 |
CDC42SE2 | PGM5 | ENSNMEP00000000389 | ENSNMEP00000009985 | CDC42 small effector protein 2. | Phosphoglucomutase-like protein 5. | 0.577 |
CDC42SE2 | RAI2 | ENSNMEP00000000389 | ENSNMEP00000017855 | CDC42 small effector protein 2. | Retinoic acid-induced protein 2. | 0.619 |
CDC42SE2 | RIT2 | ENSNMEP00000000389 | ENSNMEP00000017380 | CDC42 small effector protein 2. | GTP-binding protein Rit2. | 0.620 |
CDC42SE2 | SCML2 | ENSNMEP00000000389 | ENSNMEP00000017852 | CDC42 small effector protein 2. | Sex comb on midleg-like protein 2 isoform X1. | 0.584 |
DEPDC1B | CAPSL | ENSNMEP00000006820 | ENSNMEP00000002904 | DEP domain-containing protein 1B isoform X1. | Calcyphosin-like protein. | 0.762 |
DEPDC1B | CDC42SE2 | ENSNMEP00000006820 | ENSNMEP00000000389 | DEP domain-containing protein 1B isoform X1. | CDC42 small effector protein 2. | 0.661 |
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