ELOVL7 protein (Numida meleagris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ELOVL7

Elongation of very long chain fatty acids protein 7. (279 aa)

Predicted Functional Partners:

HSD17B12

0.925

ELOVL5

0.904

ELOVL1

0.901

HACD3

0.626

HACD2

0.587

OXSM

0.579

DEPDC1B

0.573

DBI

0.515

RLIM

0.502

NIPAL4

0.491

Your Current Organism:

Numida meleagris

NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DBI	ELOVL7	ENSNMEP00000027711	ENSNMEP00000006821	Diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein).	Elongation of very long chain fatty acids protein 7.	0.515
DBI	OXSM	ENSNMEP00000027711	ENSNMEP00000010324	Diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein).	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.	0.593
DEPDC1B	ELOVL7	ENSNMEP00000006820	ENSNMEP00000006821	DEP domain-containing protein 1B isoform X1.	Elongation of very long chain fatty acids protein 7.	0.573
ELOVL1	ELOVL7	ENSNMEP00000025070	ENSNMEP00000006821	Elongation of very long chain fatty acids protein 1.	Elongation of very long chain fatty acids protein 7.	0.901
ELOVL1	HSD17B12	ENSNMEP00000025070	ENSNMEP00000009846	Elongation of very long chain fatty acids protein 1.	17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.	0.955
ELOVL5	ELOVL7	ENSNMEP00000025008	ENSNMEP00000006821	Elongation of very long chain fatty acids protein 5.	Elongation of very long chain fatty acids protein 7.	0.904
ELOVL5	HACD2	ENSNMEP00000025008	ENSNMEP00000027641	Elongation of very long chain fatty acids protein 5.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1.	0.914
ELOVL5	HSD17B12	ENSNMEP00000025008	ENSNMEP00000009846	Elongation of very long chain fatty acids protein 5.	17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.	0.932
ELOVL7	DBI	ENSNMEP00000006821	ENSNMEP00000027711	Elongation of very long chain fatty acids protein 7.	Diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein).	0.515
ELOVL7	DEPDC1B	ENSNMEP00000006821	ENSNMEP00000006820	Elongation of very long chain fatty acids protein 7.	DEP domain-containing protein 1B isoform X1.	0.573
ELOVL7	ELOVL1	ENSNMEP00000006821	ENSNMEP00000025070	Elongation of very long chain fatty acids protein 7.	Elongation of very long chain fatty acids protein 1.	0.901
ELOVL7	ELOVL5	ENSNMEP00000006821	ENSNMEP00000025008	Elongation of very long chain fatty acids protein 7.	Elongation of very long chain fatty acids protein 5.	0.904
ELOVL7	HACD2	ENSNMEP00000006821	ENSNMEP00000027641	Elongation of very long chain fatty acids protein 7.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1.	0.587
ELOVL7	HACD3	ENSNMEP00000006821	ENSNMEP00000027812	Elongation of very long chain fatty acids protein 7.	3-hydroxyacyl-CoA dehydratase 3.	0.626
ELOVL7	HSD17B12	ENSNMEP00000006821	ENSNMEP00000009846	Elongation of very long chain fatty acids protein 7.	17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.	0.925
ELOVL7	NIPAL4	ENSNMEP00000006821	ENSNMEP00000021037	Elongation of very long chain fatty acids protein 7.	Magnesium transporter NIPA4 isoform X1.	0.491
ELOVL7	OXSM	ENSNMEP00000006821	ENSNMEP00000010324	Elongation of very long chain fatty acids protein 7.	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.	0.579
ELOVL7	RLIM	ENSNMEP00000006821	ENSNMEP00000024512	Elongation of very long chain fatty acids protein 7.	E3 ubiquitin-protein ligase RLIM isoform X1.	0.502
HACD2	ELOVL5	ENSNMEP00000027641	ENSNMEP00000025008	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1.	Elongation of very long chain fatty acids protein 5.	0.914
HACD2	ELOVL7	ENSNMEP00000027641	ENSNMEP00000006821	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1.	Elongation of very long chain fatty acids protein 7.	0.587