STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LITAFLipopolysaccharide-induced tumor necrosis factor-alpha factor isoform X1. (148 aa)    
Predicted Functional Partners:
IL6
Interleukin 6.
   
 
 0.942
ENSNMEP00000022336
annotation not available
      
 0.931
IL1B
Interleukin-1 receptor antagonist protein-like.
      
 0.928
IL10
Interleukin 10.
      
 0.915
FANCM
Fanconi anemia group M protein isoform X1.
    
 0.832
CD4
T-cell surface glycoprotein CD4 isoform X1.
    
 
 0.761
LOC110390553
Interferon type B-like.
      
 0.760
ENSNMEP00000024098
annotation not available
      
 0.760
LOC110405139
Interleukin-4-like.
      
 0.760
IL4
Interleukin 4.
      
 0.760
Your Current Organism:
Numida meleagris
NCBI taxonomy Id: 8996
Other names: N. meleagris, helmeted guineafowl
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.